Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015852716.1_cds_XP_016511932.1_24623
CDS Infomation

[gene=LOC107829034] [db_xref=GeneID:107829034] [protein=putative pentatricopeptide repeat-containing protein At1g74400] [protein_id=XP_016511932.1] [location=4047..5327] [gbkey=CDS]
Sequence

ATGATAAGATTCTTGCACAAGGTGGCCAATTCTTTTAACAGTGCAAAACAGCCCCAAATC
CATTTCCATAAACAACTTAAACCAGCAAGAGCAAACCTGACCCTGAAAAGCTACCTCAAG
TCTAATCCTATCAAGACTATTTTGCTGTTCTCTGACTTGCTGAGAAAAAAGATTTCTGCA
GTAGATAGCTACTCTCTACTGTATGTCATCAAAGCTTGCACTAAAAATTCCCTGGCCACT
GAAGGCAAACAAGCCCATGGCCTTGTCATTAAACTTGGCTACGAACCCATCATTTTTCTT
CAAACATCGCTTATGAATTTGTATGCTGCAACTGCAAGTGTCGCTGATGTTCATCAGGTG
TTTGATGAAATACCCAATAAGAATGTTGTGTGTTGGACTTCACTGATTTCGGCGTATGTC
CAGAACCAGAAACCAAATAGAGCCATAGAGATATTCAGGCAAATGCAAATGGATGATGTA
GAGCCTGATCAGGTAATACTCACTGTTGCTCTATCGGCTTGTGCTGATCTAGGGGCATTG
CATAAAGGGGAATGGATTCATGAGCTGATAAGTCAAAAGACGGATTTTAGCGAAGATTTA
TGCTTAATGAATGCTCTGTTGAACATGTATGTAAAATGTGGGGATATCAGAAAAGCTAAG
TTATTGTTTGATAATGTGAAAATTAAGGATGTTAGGACTTGGACTTGCATGATTGTTGGG
CATGCATTACACGGCCAAGCAGAGGAAGCGCTAAGGCTGTTTTCAGCATTGGAAGAAGAA
AACAAGTCAAGATCAAGTAAAAGCCGAGAAACTAAGGACCAATTACTTGTTCCCAATGAT
GTCATGTTTATAGGGGTTCTAATGGCTTGTAGCCACGCAGGGATGGTGGAAGAGGGGAAA
AGGTATTTTAGAAGTATGATTGAGGAGTACGGCTTAAAGCCTAGGCTTTCTCACTTTGGC
TGCATGGTGGATTTGTTATGCCGTTGTGGGCTTCTAAACGAGGCGTATAGCTTTATTTTG
GCAATGCCAATCCAGCCAAATGCAGTTATATGGAGGACATTACTGGGTGCCTCTGGCGTT
CAAGGCAATGTAGAACTTGCTGCAGTGGCTCGGTCTAAATTAGGCGAGTTAGAGGTTAGT
GTCGTTGGTGATGATGTTGCATTGTCTAATATTTATGCTGCCAAAGGCATGTGGGAGGAG
AAAATAATGCTAAGACATGAGATGAGACAAAGGAGAACTCCTGGCTGCAGTTCAGTTGAG
GTGGGAAAGTTGCATTCTTGA

Peptide Sequence

PEP ID

XP_016511932.1
PEP Infomation

PREDICTED: putative pentatricopeptide repeat-containing protein At1g74400 [Nicotiana tabacum]
Sequence

MIRFLHKVANSFNSAKQPQIHFHKQLKPARANLTLKSYLKSNPIKTILLFSDLLRKKISA
VDSYSLLYVIKACTKNSLATEGKQAHGLVIKLGYEPIIFLQTSLMNLYAATASVADVHQV
FDEIPNKNVVCWTSLISAYVQNQKPNRAIEIFRQMQMDDVEPDQVILTVALSACADLGAL
HKGEWIHELISQKTDFSEDLCLMNALLNMYVKCGDIRKAKLLFDNVKIKDVRTWTCMIVG
HALHGQAEEALRLFSALEEENKSRSSKSRETKDQLLVPNDVMFIGVLMACSHAGMVEEGK
RYFRSMIEEYGLKPRLSHFGCMVDLLCRCGLLNEAYSFILAMPIQPNAVIWRTLLGASGV
QGNVELAAVARSKLGELEVSVVGDDVALSNIYAAKGMWEEKIMLRHEMRQRRTPGCSSVE
VGKLHS

Transcript Sequence

Gene sequence data has not been registered.